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An introduction to simpleCache8 months ago
Your first cache | Comparison to base R save() and load() | Cache names | Creating but not loading caches | Loading multiple caches | Timing cache creating | Complicated code | Custom serialization backends
Amendments in pepr8 months ago
Learn amendments in pepr | Problem/Goal | Solution | Code
Getting Started with pepr8 months ago
Introduction to pepr | Installing pepr | Loading an example project | Interfacing with your pepr::Project object in R
Sample modifiers in pepr: append8 months ago
Learn append sample modifier in pepr | Problem/Goal | Solution | Code
Sample modifiers in pepr: derive8 months ago
Learn derived attributes in pepr | Problem/Goal | Solution | Code
Sample modifiers in pepr: imply8 months ago
Learn implied sample modifier in pepr | Problem/Goal | Solution | Code
Subsample table in pepr8 months ago
Learn sample subannotations in pepr | Problem/Goal | Solutions | Example 1: basic sample subannotation table | Example 2: subannotations and derived attributes | Example 3: subannotations and expansion characters | Example 4: subannotations and multiple (separate-class) inputs
Generating caches on a cluster8 months ago
Generating caches in parallel using batchtools | Lock files
Sample modifiers in pepr: imply and derive3 years ago
Learn how to combine implied and derived attributes in pepr | Problem/Goal | Solution | Code
Getting Started with LOLA7 years ago
LOLA bioconductor package | Preparing analysis | Run the analysis | Exploring LOLA Results | Extracting certain region sets from a database
Choosing a LOLA Universe9 years ago
What's the universe?
Using LOLA Core9 years ago
Loading full-scale example data | Running the enrichment | Exploring results | Mystery set identity
Sharing caches across projects9 years ago